医療系パッケージ一覧
をテンプレートにして作成
[
トップ
] [
新規
|
一覧
|
検索
|
最終更新
|
ヘルプ
]
開始行:
目的：医療系(臨床／疫学他）のパッケージを蓄積します。（追...
#contents
----
*CRAN Task View [#n618b43f]
**Medical Image Analysis 医用画像分析[#yfebbb51]
http://cran.md.tsukuba.ac.jp/web/views/MedicalImaging.html~
**Survival Analysis 生存分析 [#e5ab7f10]
http://cran.md.tsukuba.ac.jp/web/views/Survival.html~
**Analysis of Pharmacokinetic Data 薬物動態データの分析[#...
http://cran.md.tsukuba.ac.jp/web/views/Pharmacokinetics.h...
**Statistical Genetics 統計遺伝学[#mdff4a85]
http://cran.md.tsukuba.ac.jp/web/views/Genetics.html
*bioconductor [#ia9bef6a]
http://www.bioconductor.org/
*医用画像分析 [#r7d83c98]
**oro.dicom: Rigorous - DICOM Input / Output [#e0f1f310]
Data input/output functions for data that conform to the ...
http://cran.md.tsukuba.ac.jp/web/packages/oro.dicom/
DICOM形式のファイルはHeaderデータとImageデータで構成され...
oro.dicomを使ってDICOM形式からANALIZE形式およびNIfTI形式...
oro.dicom中のオブジェクト一覧
|項目|説明|
|create3D |DICOM Headers/Imagesから配列を...
|dec2base |10進数を任意の基数で表した文字...
|dicom.dic |DICOM Header情報のルックアップ...
|dicom2analyze |DICOM HeaderをAnalyze形式に変換|
|dicom2nifti |DICOM HeaderをNIfTI形式に変換|
|dicomInfo |単一のDICOMファイルを読み込み|
|dicomSeparate |ディレクトリ内の全てのDICOMファ...
|dicomTable |DICOM Headerからデータフレーム...
|extractHeader |DICOM Headerから単一のフィール...
|floating.header |DICOM Headerを扱うための内部関数|
|getOrientation |方向余弦(Direction Cosine)を解...
|header2matrix |DICOM Headerフィールドを行列に...
|is.axial |軸状断（体軸に直交する平面）で...
|matchHeader |与えた文字列がDICOM Headerフィ...
|nextHeader |与えた文字列とDICOM Headerフィ...
|str2time |DICOM Time/Date Entryを変換する|
|swapDimension |DICOM Headerフィールドを使ってR...
|writeHeader |DICOMテーブルをASCIIファイルに...
**tractor.base: Basic functions for the TractoR (tractogr...
The tractor.base package consists of functions for workin...
http://cran.md.tsukuba.ac.jp/web/packages/tractor.base/
**dti: DTI/DWI Analysis [#xd3e13cb]
Diffusion Weighted Imaging is a Magnetic Resonance Imagin...
http://cran.md.tsukuba.ac.jp/web/packages/dti/
**dcemri: A Package for Medical Image Analysis [#fd53ff56]
A collection of routines and documentation that allows on...
http://cran.md.tsukuba.ac.jp/web/packages/dcemri/
**fmri: Analysis of fMRI experiments [#t83097fe]
The library contains R-functions to perform an fmri analy...
http://cran.md.tsukuba.ac.jp/web/packages/fmri/
|項目|説明|
|cutroi |I/O function|
|extract.data |Extract data or residuals from ...
|fmri.design |Linear Model for FMRI Data|
|fmri.detrend |Detrend fMRI time series|
|fmri.gui |Graphical user interface|
|fmri.lm |Linear Model For FMRI Data|
|fmri.pvalue |P-values|
|fmri.smooth |Smoothing Statistical Parametri...
|fmri.stimulus |Linear Model for FMRI Data|
|fmriica |Independent Component Analysis|
|ngca |Non-Gaussian Component Analysis|
|plot.fmridata |I/O functions|
|print.fmridata |I/O functions|
|read.AFNI |I/O function|
|read.ANALYZE |I/O Functions|
|read.DICOM |I/O function|
|read.NIFTI |I/O Functions|
|summary.fmridata |I/O functions|
|write.AFNI |I/O functions|
|write.ANALYZE |I/O Functions|
|write.NIFTI |I/O Functions|
**AnalyzeFMRI: Functions for analysis of fMRI datasets st...
Functions for I/O, visualisation and analysis of function...
http://cran.md.tsukuba.ac.jp/web/packages/AnalyzeFMRI/
**RImageJ: R bindings for ImageJ [#ya865ac4]
Bindings between R and the ImageJ java based image proces...
http://cran.md.tsukuba.ac.jp/web/packages/RImageJ/~
ImageJはその思想的祖先であるNIHimageと同様にアメリカ国立...
**PET: Simulation and Reconstruction of PET Images [#jd65...
This package implements different analytic/direct and ite...
http://cran.md.tsukuba.ac.jp/web/packages/PET/
**diffractometry: Baseline identification and peak decomp...
Residual-based baseline identification and peak decomposi...
http://cran.md.tsukuba.ac.jp/web/packages/diffractometry/
*疫学 [#sa31b9e1]
**epiR: Functions for analysing epidemiological data [#ic...
A package for analysing epidemiological data. Contains fu...
http://cran.md.tsukuba.ac.jp/web/packages/epiR/
**epibasix: Elementary Epidemiological Functions for a Gr...
This package contains elementary tools for analysis of co...
http://cran.md.tsukuba.ac.jp/web/packages/epibasix/
**epicalc: Epidemiological calculator [#m89890e4]
Functions making R easy for epidemiological calculation.~
http://cran.md.tsukuba.ac.jp/web/packages/epicalc/
**epitools: Epidemiology Tools [#a467d7ea]
EpiTools: R Package for Epidemiologic Data and Graphics~
http://cran.md.tsukuba.ac.jp/web/packages/epitools/
**amei: Adaptive Management of Epidemiological Interventi...
This package provides a flexible statistical framework fo...
http://cran.md.tsukuba.ac.jp/web/packages/amei/
**surveillance: Outbreak detection algorithms for surveil...
A package implementing statistical methods for the survei...
http://cran.md.tsukuba.ac.jp/web/packages/surveillance/
**diseasemapping: Calculate SMR's from population and cas...
works with regular data set file and shape file.~
http://cran.md.tsukuba.ac.jp/web/packages/diseasemapping/
//**Lifetable Calculations [#l0106493]
//Allows the calculation of lifetables using demographic ...
//https://r-forge.r-project.org/projects/lifetables/
**rmodest [#h0631820]
Rmodest is a package that will allow you to easily fit mo...
https://r-forge.r-project.org/projects/rmodest/
**DCluster 空間疫学 : Functions for the detection of spat...
A set of functions for the detection of spatial clusters ...
http://cran.md.tsukuba.ac.jp/web/packages/DCluster/
*臨床診断 [#l4c25603]
**DiagnosisMed: Diagnostic test accuracy evaluation for m...
DiagnosisMed is a package to analyze data from diagnostic...
http://cran.md.tsukuba.ac.jp/web/packages/DiagnosisMed/
//** diagnosis [#j4753db1]
//An R package for evaluation of the accuracy of diagnost...
//https://r-forge.r-project.org/projects/diagnosis/
**Optimal Two-stage Phase II Design [#n7268c7f]
This R package OptimPhase2 creates the optimal two-stage ...
https://r-forge.r-project.org/projects/optimphase2/
*臨床検査 [#x08c39d1]
**RHRV: Heart rate variability analysis of ECG data [#ac9...
This is a package for developing heart rate variability s...
http://cran.md.tsukuba.ac.jp/web/packages/RHRV/
*薬理・服薬 [#q666e2c7]
**MIfuns: Pharmacometric tools for data preparation, anal...
Pharmacometric tools for common data preparation tasks, s...
http://cran.md.tsukuba.ac.jp/web/packages/MIfuns/
**stab: data analysis of drug stability [#o1117d54]
A menu-driven package for data analysis of drug stability...
http://cran.md.tsukuba.ac.jp/web/packages/stab/
**PKfit: A Data Analysis Tool for Pharmacokinetics [#yfe5...
PKfit is a nonlinear regression (including a genetic algo...
http://cran.md.tsukuba.ac.jp/web/packages/PKfit/
**medAdherence: Medication Adherence: Commonly Used Defin...
Medication Adherence: Commonly Used Definitions~
http://cran.md.tsukuba.ac.jp/web/packages/medAdherence/
**PhViD: Pharmacovigilance signal detection methods exten...
PhViD proposes the main pharmacovigilance signal detectio...
http://cran.md.tsukuba.ac.jp/web/packages/PhViD/
**PK: Basic Non-Compartmental Pharmacokinetics [#e542a1c9]
Estimation of pharmacokinetic parameters using non-compar...
http://cran.md.tsukuba.ac.jp/web/packages/PK/
**mixlow: mixlow method for assessing drug synergism [#s8...
mixlow software for assessing drug synergism/antagonism~
http://cran.md.tsukuba.ac.jp/web/packages/mixlow/
**tdm: A Tool for Therapeutic Drug Monitoring (TDM) [#jb1...
TDM can be used to estimate individual pharmacokinetic pa...
http://cran.md.tsukuba.ac.jp/web/packages/tdm/
*病院・経営 [#x47d2464]
**rhosp: Side effect risks in hospital : simulation and e...
Evaluating risk (that a patient arises a side effect) dur...
http://cran.md.tsukuba.ac.jp/web/packages/rhosp/
終了行:
目的：医療系(臨床／疫学他）のパッケージを蓄積します。（追...
#contents
----
*CRAN Task View [#n618b43f]
**Medical Image Analysis 医用画像分析[#yfebbb51]
http://cran.md.tsukuba.ac.jp/web/views/MedicalImaging.html~
**Survival Analysis 生存分析 [#e5ab7f10]
http://cran.md.tsukuba.ac.jp/web/views/Survival.html~
**Analysis of Pharmacokinetic Data 薬物動態データの分析[#...
http://cran.md.tsukuba.ac.jp/web/views/Pharmacokinetics.h...
**Statistical Genetics 統計遺伝学[#mdff4a85]
http://cran.md.tsukuba.ac.jp/web/views/Genetics.html
*bioconductor [#ia9bef6a]
http://www.bioconductor.org/
*医用画像分析 [#r7d83c98]
**oro.dicom: Rigorous - DICOM Input / Output [#e0f1f310]
Data input/output functions for data that conform to the ...
http://cran.md.tsukuba.ac.jp/web/packages/oro.dicom/
DICOM形式のファイルはHeaderデータとImageデータで構成され...
oro.dicomを使ってDICOM形式からANALIZE形式およびNIfTI形式...
oro.dicom中のオブジェクト一覧
|項目|説明|
|create3D |DICOM Headers/Imagesから配列を...
|dec2base |10進数を任意の基数で表した文字...
|dicom.dic |DICOM Header情報のルックアップ...
|dicom2analyze |DICOM HeaderをAnalyze形式に変換|
|dicom2nifti |DICOM HeaderをNIfTI形式に変換|
|dicomInfo |単一のDICOMファイルを読み込み|
|dicomSeparate |ディレクトリ内の全てのDICOMファ...
|dicomTable |DICOM Headerからデータフレーム...
|extractHeader |DICOM Headerから単一のフィール...
|floating.header |DICOM Headerを扱うための内部関数|
|getOrientation |方向余弦(Direction Cosine)を解...
|header2matrix |DICOM Headerフィールドを行列に...
|is.axial |軸状断（体軸に直交する平面）で...
|matchHeader |与えた文字列がDICOM Headerフィ...
|nextHeader |与えた文字列とDICOM Headerフィ...
|str2time |DICOM Time/Date Entryを変換する|
|swapDimension |DICOM Headerフィールドを使ってR...
|writeHeader |DICOMテーブルをASCIIファイルに...
**tractor.base: Basic functions for the TractoR (tractogr...
The tractor.base package consists of functions for workin...
http://cran.md.tsukuba.ac.jp/web/packages/tractor.base/
**dti: DTI/DWI Analysis [#xd3e13cb]
Diffusion Weighted Imaging is a Magnetic Resonance Imagin...
http://cran.md.tsukuba.ac.jp/web/packages/dti/
**dcemri: A Package for Medical Image Analysis [#fd53ff56]
A collection of routines and documentation that allows on...
http://cran.md.tsukuba.ac.jp/web/packages/dcemri/
**fmri: Analysis of fMRI experiments [#t83097fe]
The library contains R-functions to perform an fmri analy...
http://cran.md.tsukuba.ac.jp/web/packages/fmri/
|項目|説明|
|cutroi |I/O function|
|extract.data |Extract data or residuals from ...
|fmri.design |Linear Model for FMRI Data|
|fmri.detrend |Detrend fMRI time series|
|fmri.gui |Graphical user interface|
|fmri.lm |Linear Model For FMRI Data|
|fmri.pvalue |P-values|
|fmri.smooth |Smoothing Statistical Parametri...
|fmri.stimulus |Linear Model for FMRI Data|
|fmriica |Independent Component Analysis|
|ngca |Non-Gaussian Component Analysis|
|plot.fmridata |I/O functions|
|print.fmridata |I/O functions|
|read.AFNI |I/O function|
|read.ANALYZE |I/O Functions|
|read.DICOM |I/O function|
|read.NIFTI |I/O Functions|
|summary.fmridata |I/O functions|
|write.AFNI |I/O functions|
|write.ANALYZE |I/O Functions|
|write.NIFTI |I/O Functions|
**AnalyzeFMRI: Functions for analysis of fMRI datasets st...
Functions for I/O, visualisation and analysis of function...
http://cran.md.tsukuba.ac.jp/web/packages/AnalyzeFMRI/
**RImageJ: R bindings for ImageJ [#ya865ac4]
Bindings between R and the ImageJ java based image proces...
http://cran.md.tsukuba.ac.jp/web/packages/RImageJ/~
ImageJはその思想的祖先であるNIHimageと同様にアメリカ国立...
**PET: Simulation and Reconstruction of PET Images [#jd65...
This package implements different analytic/direct and ite...
http://cran.md.tsukuba.ac.jp/web/packages/PET/
**diffractometry: Baseline identification and peak decomp...
Residual-based baseline identification and peak decomposi...
http://cran.md.tsukuba.ac.jp/web/packages/diffractometry/
*疫学 [#sa31b9e1]
**epiR: Functions for analysing epidemiological data [#ic...
A package for analysing epidemiological data. Contains fu...
http://cran.md.tsukuba.ac.jp/web/packages/epiR/
**epibasix: Elementary Epidemiological Functions for a Gr...
This package contains elementary tools for analysis of co...
http://cran.md.tsukuba.ac.jp/web/packages/epibasix/
**epicalc: Epidemiological calculator [#m89890e4]
Functions making R easy for epidemiological calculation.~
http://cran.md.tsukuba.ac.jp/web/packages/epicalc/
**epitools: Epidemiology Tools [#a467d7ea]
EpiTools: R Package for Epidemiologic Data and Graphics~
http://cran.md.tsukuba.ac.jp/web/packages/epitools/
**amei: Adaptive Management of Epidemiological Interventi...
This package provides a flexible statistical framework fo...
http://cran.md.tsukuba.ac.jp/web/packages/amei/
**surveillance: Outbreak detection algorithms for surveil...
A package implementing statistical methods for the survei...
http://cran.md.tsukuba.ac.jp/web/packages/surveillance/
**diseasemapping: Calculate SMR's from population and cas...
works with regular data set file and shape file.~
http://cran.md.tsukuba.ac.jp/web/packages/diseasemapping/
//**Lifetable Calculations [#l0106493]
//Allows the calculation of lifetables using demographic ...
//https://r-forge.r-project.org/projects/lifetables/
**rmodest [#h0631820]
Rmodest is a package that will allow you to easily fit mo...
https://r-forge.r-project.org/projects/rmodest/
**DCluster 空間疫学 : Functions for the detection of spat...
A set of functions for the detection of spatial clusters ...
http://cran.md.tsukuba.ac.jp/web/packages/DCluster/
*臨床診断 [#l4c25603]
**DiagnosisMed: Diagnostic test accuracy evaluation for m...
DiagnosisMed is a package to analyze data from diagnostic...
http://cran.md.tsukuba.ac.jp/web/packages/DiagnosisMed/
//** diagnosis [#j4753db1]
//An R package for evaluation of the accuracy of diagnost...
//https://r-forge.r-project.org/projects/diagnosis/
**Optimal Two-stage Phase II Design [#n7268c7f]
This R package OptimPhase2 creates the optimal two-stage ...
https://r-forge.r-project.org/projects/optimphase2/
*臨床検査 [#x08c39d1]
**RHRV: Heart rate variability analysis of ECG data [#ac9...
This is a package for developing heart rate variability s...
http://cran.md.tsukuba.ac.jp/web/packages/RHRV/
*薬理・服薬 [#q666e2c7]
**MIfuns: Pharmacometric tools for data preparation, anal...
Pharmacometric tools for common data preparation tasks, s...
http://cran.md.tsukuba.ac.jp/web/packages/MIfuns/
**stab: data analysis of drug stability [#o1117d54]
A menu-driven package for data analysis of drug stability...
http://cran.md.tsukuba.ac.jp/web/packages/stab/
**PKfit: A Data Analysis Tool for Pharmacokinetics [#yfe5...
PKfit is a nonlinear regression (including a genetic algo...
http://cran.md.tsukuba.ac.jp/web/packages/PKfit/
**medAdherence: Medication Adherence: Commonly Used Defin...
Medication Adherence: Commonly Used Definitions~
http://cran.md.tsukuba.ac.jp/web/packages/medAdherence/
**PhViD: Pharmacovigilance signal detection methods exten...
PhViD proposes the main pharmacovigilance signal detectio...
http://cran.md.tsukuba.ac.jp/web/packages/PhViD/
**PK: Basic Non-Compartmental Pharmacokinetics [#e542a1c9]
Estimation of pharmacokinetic parameters using non-compar...
http://cran.md.tsukuba.ac.jp/web/packages/PK/
**mixlow: mixlow method for assessing drug synergism [#s8...
mixlow software for assessing drug synergism/antagonism~
http://cran.md.tsukuba.ac.jp/web/packages/mixlow/
**tdm: A Tool for Therapeutic Drug Monitoring (TDM) [#jb1...
TDM can be used to estimate individual pharmacokinetic pa...
http://cran.md.tsukuba.ac.jp/web/packages/tdm/
*病院・経営 [#x47d2464]
**rhosp: Side effect risks in hospital : simulation and e...
Evaluating risk (that a patient arises a side effect) dur...
http://cran.md.tsukuba.ac.jp/web/packages/rhosp/
ページ名:
![[RjpWiki]](image/../Rlogo.png "[RjpWiki]")
